Difference between revisions of "Genesetdb"
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Latest revision as of 02:40, 19 March 2014
<html>
<head>
<title>genetable for the ooga</title>
</head>
<body>
<h1> Genetable</h1>
<table border="1">
<tr>
<th>Experiment Number</th>
<th>Gene ID</th>
</tr>
<?php
$con= mysqli_connect("localhost", "ooga", "booga","genesetdb");
if(mysqli_connect_errno())
{
die( "could not connect: " . mysqli_connect_error());
}
// Get absolute count of rows in table "genesets"; export
// that count into a variable called $pidcount
$sql = "SELECT COUNT(*) AS cnt FROM `genesets`;";
$result = mysqli_query($con, $sql);
$row = mysqli_fetch_array($result);
$pidcount = $row['cnt'];
/*
Now get the entirety of genesets and CHOWN THE HELL OUT OF IT!
Where "CHOWNing" in this case means the generation of a table
that looks roughly like:
pid geneid
--- ------
1 $row[3]
1 $row[4]
1 $row[5]
...
1 $row[203]
2 $row[3]
...
*/
$sql = "SELECT * FROM `genesets`;";
$result = mysqli_query($con, $sql);
while($row = mysqli_fetch_array($result))
{
for($i = 3; $i<204; $i++)
{
$booga = "INSERT INTO finalgeneset(exp,geneid) VALUES(" . $row[0] . "," . $row[$i] . ");";
$ooga = mysqli_query($con, $booga);
echo '
<tr>
<td>' . $row[0] . '</td>
<td>' . $row[$i] . '</td>
</tr>
';
}
}
?>
</table>
</body>
</html>
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